Figure B-7_a&b Page B-21LH-II of Rhodopseudomonas acidophila & Rhodospirillum molischianum.
Figure B-7_a&b Page B-21
LH-II of Rhodopseudomonas acidophila & Rhodospirillum molischianum.
Figure B-7_c&d Page B-21
PCP of Amphidinium carterae & bacteriochlorophyll protein of Prosthecochloris aestuarii.
C-alfa_only
initial structure.
This image didn't quite make it in the thesis. It
shows the initial structure I received and had to work on. The
initial information was just the coordinates of the C-alfa atoms,
represented by the spheres in the image, and of the chlorophyll rings.
Figure B-10 Page B-32
Structure of LHC II inserted in the membrane (position of the
phospholipidic bilayer indicated by the grey discs).
Figure D-19 Page D-117
Frames of the molecular simulation
Figure D-20 Page D-123
Graphic representation of the simulation results. Residue His212 after
a normal minimization or normal simulated annealing (above). The same
residue after application of the protocol of simulated annealing using
relaxed force constants (below).
Figure D-31 Page D-147
The reconstructed trimer structure. Top view - Side view.
Figure D-34 Page D-157
Hypothetical complex salt bridges
Figure D-35 Page D-163
Model 1. With (above) and without (below) the chlorophylls.
Figure D-36 Page D-167
Model 2. With (above) and without (below) the chlorophylls.
Figure D-37 Page D-171
Model 3. With (above) and without (below) the chlorophylls.
Figure D-38 Page D-179
The hyphotetical coordination of chlorophyll a3 in the CP24 protein
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